AT1G19440 (KCS4)

Aliases : KCS4

Description : 3-ketoacyl-CoA synthase 4

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0000139 (LandPlants) Phylogenetic Tree(s): OG_05_0000139_tree ,
OG_06_0000189 (SeedPlants) Phylogenetic Tree(s): OG_06_0000189_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G19440

Target	Alias	Description	ECC score	Gene Family Method
AT2G16280	KCS9	3-ketoacyl-CoA synthase 9	0.05	Archaeplastida
GSVIVT01015472001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Gb_20857	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
LOC_Os05g49290.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Mp1g06080.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.01	Archaeplastida
Zm00001e037353_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IDA	Interproscan
BP	GO:0000038	very long-chain fatty acid metabolic process	RCA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042335	cuticle development	IDA	Interproscan
BP	GO:0042335	cuticle development	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000036	acyl carrier activity	IEP	Neighborhood
MF	GO:0004312	fatty acid synthase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004506	squalene monooxygenase activity	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006722	triterpenoid metabolic process	IEP	Neighborhood
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Neighborhood
BP	GO:0010393	galacturonan metabolic process	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
BP	GO:0016104	triterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016125	sterol metabolic process	IEP	Neighborhood
BP	GO:0016126	sterol biosynthetic process	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016297	acyl-[acyl-carrier-protein] hydrolase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	Neighborhood
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
MF	GO:0044620	ACP phosphopantetheine attachment site binding	IEP	Neighborhood
BP	GO:0045488	pectin metabolic process	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0051192	prosthetic group binding	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Neighborhood
BP	GO:0052546	cell wall pectin metabolic process	IEP	Neighborhood
MF	GO:0140104	molecular carrier activity	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	410	490
IPR013601	FAE1_typ3_polyketide_synth	104	393

External Links

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AT1G19440 (KCS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation