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  5. Pp3c21_19210V3.1

Pp3c21_19210V3.1


Description : Domain of unknown function (DUF23)


Gene families : OG0000886 (Archaeplastida) Phylogenetic Tree(s): OG0000886_tree ,
OG_05_0016123 (LandPlants) Phylogenetic Tree(s): OG_05_0016123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_19210V3.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013454001 No alias Cell wall.pectin.rhamnogalacturonan... 0.02 Archaeplastida
Gb_35535 No alias beta-1,4-galactosyltransferase 0.03 Archaeplastida
MA_10433350g0010 No alias beta-1,4-galactosyltransferase 0.02 Archaeplastida
MA_4044619g0010 No alias Galactan beta-1,4-galactosyltransferase GALS1... 0.02 Archaeplastida
Solyc04g082950.4.1 No alias beta-1,4-galactosyltransferase 0.02 Archaeplastida
Zm00001e015629_P001 No alias beta-1,4-galactosyltransferase 0.06 Archaeplastida
Zm00001e031030_P001 No alias beta-1,4-galactosyltransferase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!