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  5. Pp3c21_22430V3.1

Pp3c21_22430V3.1


Description : RNA polymerase I-associated factor PAF67


Gene families : OG0004415 (Archaeplastida) Phylogenetic Tree(s): OG0004415_tree ,
OG_05_0004927 (LandPlants) Phylogenetic Tree(s): OG_05_0004927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_22430V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00071210 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 Archaeplastida
AT5G25754 No alias RNA polymerase I-associated factor PAF67 0.03 Archaeplastida
Cpa|evm.model.tig00022075.15 No alias Protein biosynthesis.translation... 0.04 Archaeplastida
Cre17.g697450 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
GSVIVT01035660001 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
LOC_Os05g13950.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
MA_4833g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
Smo146079 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Solyc08g068340.3.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida
Zm00001e016402_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Zm00001e026109_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!