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  5. AT4G28170

AT4G28170


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11120.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0003757 (Archaeplastida) Phylogenetic Tree(s): OG0003757_tree ,
OG_05_0002607 (LandPlants) Phylogenetic Tree(s): OG_05_0002607_tree ,
OG_06_0040860 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28170
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00259750 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
GSVIVT01006946001 No alias No description available 0.02 Archaeplastida
LOC_Os07g37820.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g12290.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g103500.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g006590.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e010569_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019078_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031716_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0001666 response to hypoxia IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004022 alcohol dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004737 pyruvate decarboxylase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009830 cell wall modification involved in abscission IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010022 meristem determinacy IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010101 post-embryonic root morphogenesis IEP Neighborhood
BP GO:0010102 lateral root morphogenesis IEP Neighborhood
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Neighborhood
MF GO:0010297 heteropolysaccharide binding IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010432 bract development IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010451 floral meristem growth IEP Neighborhood
BP GO:0010582 floral meristem determinacy IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034059 response to anoxia IEP Neighborhood
BP GO:0035266 meristem growth IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044277 cell wall disassembly IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0051749 indole acetic acid carboxyl methyltransferase activity IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
BP GO:0071732 cellular response to nitric oxide IEP Neighborhood
BP GO:0080086 stamen filament development IEP Neighborhood
BP GO:0090506 axillary shoot meristem initiation IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
BP GO:2000280 regulation of root development IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!