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  5. Pp3c22_16330V3.1

Pp3c22_16330V3.1


Description : photosystem II reaction center W


Gene families : OG0005301 (Archaeplastida) Phylogenetic Tree(s): OG0005301_tree ,
OG_05_0004077 (LandPlants) Phylogenetic Tree(s): OG_05_0004077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_16330V3.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266120 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.21 Archaeplastida
AT2G30570 PSBW photosystem II reaction center W 0.39 Archaeplastida
GSVIVT01000743001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.2 Archaeplastida
GSVIVT01036277001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 Archaeplastida
Gb_40726 No alias component PsbW of PS-II complex 0.06 Archaeplastida
LOC_Os01g56680.2 No alias component PsbW of PS-II complex 0.23 Archaeplastida
LOC_Os05g43310.1 No alias component PsbW of PS-II complex 0.09 Archaeplastida
MA_10431532g0010 No alias component PsbW of PS-II complex 0.07 Archaeplastida
Mp5g14190.1 No alias component PsbW of PS-II complex 0.33 Archaeplastida
Pp3c22_16160V3.1 No alias photosystem II reaction center W 0.06 Archaeplastida
Solyc06g084050.4.1 No alias component PsbW of PS-II complex 0.19 Archaeplastida
Solyc09g065910.3.1 No alias component PsbW of PS-II complex 0.03 Archaeplastida
Zm00001e019660_P002 No alias component PsbW of PS-II complex 0.18 Archaeplastida
Zm00001e027386_P002 No alias component PsbW of PS-II complex 0.19 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 5 138
No external refs found!