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  5. Pp3c22_22810V3.1

Pp3c22_22810V3.1


Description : zinc ion binding;nucleic acid binding


Gene families : OG0004546 (Archaeplastida) Phylogenetic Tree(s): OG0004546_tree ,
OG_05_0002973 (LandPlants) Phylogenetic Tree(s): OG_05_0002973_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_22810V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_8160V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c19_8160V3.1 No alias No annotation 0.01 Archaeplastida
Pp3c4_20055V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c5_6141V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c6_4640V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c7_24920V3.1 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006313 transposition, DNA-mediated IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025558 DUF4283 88 213
No external refs found!