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Description : RNA helicase family protein
Gene families : OG0000159 (Archaeplastida) Phylogenetic Tree(s): OG0000159_tree ,
OG_05_0003517 (LandPlants) Phylogenetic Tree(s): OG_05_0003517_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c23_12820V3.1 | |
| Cluster | HCCA: Cluster_237 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00090p00083520 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.03 | Archaeplastida | |
| AMTR_s00110p00073830 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.02 | Archaeplastida | |
| AT1G26370 | No alias | RNA helicase family protein | 0.07 | Archaeplastida | |
| AT1G27900 | No alias | RNA helicase family protein | 0.03 | Archaeplastida | |
| AT2G47250 | No alias | RNA helicase family protein | 0.02 | Archaeplastida | |
| AT5G13010 | EMB3011 | RNA helicase family protein | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00000796.23 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00000984.27 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00022075.25 | No alias | RNA processing.RNA splicing.spliceosome... | 0.02 | Archaeplastida | |
| Cre07.g329150 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | Archaeplastida | |
| Cre07.g349100 | No alias | RNA processing.RNA splicing.spliceosome... | 0.03 | Archaeplastida | |
| Cre24.g755347 | No alias | RNA processing.RNA splicing.spliceosome... | 0.01 | Archaeplastida | |
| GSVIVT01010362001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| GSVIVT01021163001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| GSVIVT01028153001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida | |
| Gb_11931 | No alias | RNA helicase (Prp22) | 0.05 | Archaeplastida | |
| Gb_14270 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| LOC_Os01g11370.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| LOC_Os06g09280.1 | No alias | RNA helicase (Prp22) | 0.02 | Archaeplastida | |
| LOC_Os06g23530.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida | |
| LOC_Os11g20554.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| MA_10436572g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp2g13680.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| Mp4g02780.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.05 | Archaeplastida | |
| Mp4g16380.1 | No alias | RNA helicase (Prp2) | 0.04 | Archaeplastida | |
| Mp4g18940.1 | No alias | RNA helicase (Prp22) | 0.04 | Archaeplastida | |
| Solyc01g079250.3.1 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | Archaeplastida | |
| Solyc03g115390.4.1 | No alias | RNA helicase (Prp2) | 0.02 | Archaeplastida | |
| Solyc05g015040.4.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.05 | Archaeplastida | |
| Solyc07g039550.4.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| Solyc09g008120.4.1 | No alias | RNA helicase (Prp22) | 0.05 | Archaeplastida | |
| Solyc09g097820.3.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| Solyc10g076910.2.1 | No alias | RNA helicase (Prp16) | 0.05 | Archaeplastida | |
| Zm00001e001487_P003 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | Archaeplastida | |
| Zm00001e016478_P002 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| Zm00001e028404_P001 | No alias | RNA helicase (Prp22) | 0.05 | Archaeplastida | |
| Zm00001e038305_P001 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |