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  5. Pp3c23_13260V3.1

Pp3c23_13260V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0005944 (Archaeplastida) Phylogenetic Tree(s): OG0005944_tree ,
OG_05_0007050 (LandPlants) Phylogenetic Tree(s): OG_05_0007050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_13260V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT5G15550 No alias Transducin/WD40 repeat-like superfamily protein 0.1 Archaeplastida
Cpa|evm.model.tig00021428.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
Cre17.g710100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01032921001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Gb_31445 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.06 Archaeplastida
LOC_Os07g40930.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.03 Archaeplastida
MA_27009g0010 No alias Ribosome biogenesis protein WDR12 homolog OS=Oryza... 0.03 Archaeplastida
MA_97224g0010 No alias Ribosome biogenesis protein WDR12 homolog OS=Oryza... 0.03 Archaeplastida
Mp3g03210.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.11 Archaeplastida
Smo175982 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Solyc02g088780.4.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.11 Archaeplastida
Zm00001e035486_P001 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!