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  5. Pp3c23_22200V3.1

Pp3c23_22200V3.1


Description : No annotation


Gene families : OG0002472 (Archaeplastida) Phylogenetic Tree(s): OG0002472_tree ,
OG_05_0001862 (LandPlants) Phylogenetic Tree(s): OG_05_0001862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_22200V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015158001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 Archaeplastida
Gb_07255 No alias component ADA3 of SAGA transcription co-activator complex 0.02 Archaeplastida
LOC_Os01g73620.1 No alias component ADA3 of SAGA transcription co-activator complex 0.02 Archaeplastida
MA_107341g0010 No alias component ADA3 of SAGA transcription co-activator complex 0.04 Archaeplastida
Mp1g06630.1 No alias component ADA3 of SAGA transcription co-activator complex 0.05 Archaeplastida
Pp3c20_790V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c23_22170V3.1 No alias No annotation 0.02 Archaeplastida
Smo407119 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Solyc11g006960.2.1 No alias component ADA3 of SAGA transcription co-activator complex 0.03 Archaeplastida
Zm00001e018678_P002 No alias component ADA3 of SAGA transcription co-activator complex 0.03 Archaeplastida
Zm00001e027665_P001 No alias component ADA3 of SAGA transcription co-activator complex 0.06 Archaeplastida
Zm00001e029688_P001 No alias component ADA3 of SAGA transcription co-activator complex 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!