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  5. Pp3c24_3500V3.1

Pp3c24_3500V3.1


Description : F-box family protein


Gene families : OG0002088 (Archaeplastida) Phylogenetic Tree(s): OG0002088_tree ,
OG_05_0001418 (LandPlants) Phylogenetic Tree(s): OG_05_0001418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_3500V3.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
Gb_30100 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g30280.1 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_19354g0010 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g033390.3.1 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!