1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c24_4150V3.1

Pp3c24_4150V3.1


Description : Noc2p family


Gene families : OG0002701 (Archaeplastida) Phylogenetic Tree(s): OG0002701_tree ,
OG_05_0004395 (LandPlants) Phylogenetic Tree(s): OG_05_0004395_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_4150V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00060700 evm_27.TU.AmTr_v1... Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G18220 No alias Noc2p family 0.05 Archaeplastida
AT3G55510 RBL Noc2p family 0.1 Archaeplastida
Cpa|evm.model.tig00020610.71 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre09.g391652 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.14 Archaeplastida
GSVIVT01016319001 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01037396001 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os10g35280.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.11 Archaeplastida
LOC_Os12g06610.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.08 Archaeplastida
Mp1g23860.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.12 Archaeplastida
Smo144099 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g081680.4.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.07 Archaeplastida
Solyc05g023710.3.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.02 Archaeplastida
Zm00001e009196_P001 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.05 Archaeplastida
Zm00001e012606_P001 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!