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  5. AT4G30360

AT4G30360 (ATCNGC17, CNGC17)


Aliases : ATCNGC17, CNGC17

Description : cyclic nucleotide-gated channel 17


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0001368 (SeedPlants) Phylogenetic Tree(s): OG_06_0001368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30360
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00015490 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.04 Archaeplastida
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.04 Archaeplastida
Cpa|evm.model.tig00021244.33 No alias Putative cyclic nucleotide-gated ion channel 9... 0.02 Archaeplastida
GSVIVT01029404001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
GSVIVT01029407001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
Gb_32552 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
LOC_Os02g54760.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Pp3c3_20390V3.1 No alias cyclic nucleotide-binding transporter 1 0.03 Archaeplastida
Solyc02g086990.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc05g050380.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.06 Archaeplastida
Solyc07g005590.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc07g006510.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc11g069580.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
Solyc12g010010.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
Zm00001e005735_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e011591_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Zm00001e034885_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity ISS Interproscan
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0030551 cyclic nucleotide binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity IEP Neighborhood
BP GO:0003032 detection of oxygen IEP Neighborhood
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005797 Golgi medial cisterna IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006491 N-glycan processing IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0010483 pollen tube reception IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0031204 posttranslational protein targeting to membrane, translocation IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031985 Golgi cisterna IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043484 regulation of RNA splicing IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0043680 filiform apparatus IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044426 cell wall part IEP Neighborhood
CC GO:0044462 external encapsulating structure part IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
MF GO:0050513 glycoprotein 2-beta-D-xylosyltransferase activity IEP Neighborhood
BP GO:0050994 regulation of lipid catabolic process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051703 intraspecies interaction between organisms IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070483 detection of hypoxia IEP Neighborhood
BP GO:0090332 stomatal closure IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 504 592
IPR005821 Ion_trans_dom 82 408
No external refs found!