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  5. Pp3c25_1160V3.1

Pp3c25_1160V3.1


Description : prohibitin 6


Gene families : OG0000812 (Archaeplastida) Phylogenetic Tree(s): OG0000812_tree ,
OG_05_0002531 (LandPlants) Phylogenetic Tree(s): OG_05_0002531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_1160V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 evm_27.TU.AmTr_v1... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00071p00140730 evm_27.TU.AmTr_v1... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00079p00162380 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.06 Archaeplastida
AT3G27280 PHB4, ATPHB4 prohibitin 4 0.04 Archaeplastida
AT4G28510 PHB1, ATPHB1 prohibitin 1 0.03 Archaeplastida
AT5G40770 ATPHB3, PHB3 prohibitin 3 0.08 Archaeplastida
GSVIVT01001841001 No alias Prohibitin-3, mitochondrial OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01027465001 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_24064 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g38900.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 Archaeplastida
LOC_Os07g15880.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.1 Archaeplastida
MA_461651g0010 No alias Prohibitin-6, mitochondrial OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_9438062g0010 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.11 Archaeplastida
Mp1g10410.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g21750.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.04 Archaeplastida
Smo163805 No alias Protein degradation.peptidase families.metallopeptidase... 0.06 Archaeplastida
Smo444067 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc10g008140.3.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc11g010190.1.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.09 Archaeplastida
Solyc11g013260.3.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.02 Archaeplastida
Zm00001e009600_P001 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e041021_P001 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001107 Band_7 40 216
No external refs found!