1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c25_14690V3.1

Pp3c25_14690V3.1


Description : SBP (S-ribonuclease binding protein) family protein


Gene families : OG0000354 (Archaeplastida) Phylogenetic Tree(s): OG0000354_tree ,
OG_05_0000233 (LandPlants) Phylogenetic Tree(s): OG_05_0000233_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_14690V3.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00146050 evm_27.TU.AmTr_v1... Probable BOI-related E3 ubiquitin-protein ligase 3... 0.04 Archaeplastida
AT1G32740 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Archaeplastida
AT4G17680 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Archaeplastida
Gb_20174 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.03 Archaeplastida
Gb_20681 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.04 Archaeplastida
LOC_Os03g46570.1 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 Archaeplastida
LOC_Os04g32980.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g34020.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c16_25330V3.1 No alias SBP (S-ribonuclease binding protein) family protein 0.05 Archaeplastida
Solyc06g061020.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005184_P001 No alias BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e012302_P001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 Archaeplastida
Zm00001e014678_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!