1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c25_8980V3.1

Pp3c25_8980V3.1


Description : Ribosomal protein L31e family protein


Gene families : OG0002465 (Archaeplastida) Phylogenetic Tree(s): OG0002465_tree ,
OG_05_0002610 (LandPlants) Phylogenetic Tree(s): OG_05_0002610_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_8980V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00233860 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
AT2G19740 No alias Ribosomal protein L31e family protein 0.05 Archaeplastida
AT4G26230 No alias Ribosomal protein L31e family protein 0.05 Archaeplastida
Cpa|evm.model.tig00020703.20 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
GSVIVT01015251001 No alias 60S ribosomal protein L31 OS=Nicotiana glutinosa 0.09 Archaeplastida
GSVIVT01032061001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
Gb_05851 No alias component RPL31 of LSU proteome component 0.03 Archaeplastida
Gb_24728 No alias component RPL31 of LSU proteome component 0.04 Archaeplastida
LOC_Os02g48660.1 No alias component RPL31 of LSU proteome component 0.06 Archaeplastida
LOC_Os06g21480.1 No alias component RPL31 of LSU proteome component 0.03 Archaeplastida
MA_14317g0010 No alias component RPL31 of LSU proteome component 0.05 Archaeplastida
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.13 Archaeplastida
Pp3c14_7550V3.1 No alias Ribosomal protein L31e family protein 0.04 Archaeplastida
Pp3c1_34390V3.1 No alias Ribosomal protein L31e family protein 0.07 Archaeplastida
Smo268515 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Solyc05g008010.3.1 No alias component RPL31 of LSU proteome component 0.19 Archaeplastida
Solyc12g008720.2.1 No alias component RPL31 of LSU proteome component 0.18 Archaeplastida
Zm00001e003520_P001 No alias component RPL31 of LSU proteome component 0.08 Archaeplastida
Zm00001e023413_P001 No alias component RPL31 of LSU proteome component 0.1 Archaeplastida
Zm00001e036927_P001 No alias component RPL31 of LSU proteome component 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 12 93
No external refs found!