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  5. Pp3c26_10520V3.1

Pp3c26_10520V3.1


Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain


Gene families : OG0000605 (Archaeplastida) Phylogenetic Tree(s): OG0000605_tree ,
OG_05_0001455 (LandPlants) Phylogenetic Tree(s): OG_05_0001455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_10520V3.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G13730 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.03 Archaeplastida
Cpa|evm.model.tig00000829.13 No alias No description available 0.02 Archaeplastida
GSVIVT01008107001 No alias No description available 0.02 Archaeplastida
Gb_35692 No alias mRNA endoribonuclease (G3BP) 0.08 Archaeplastida
LOC_Os04g30430.1 No alias mRNA endoribonuclease (G3BP) 0.02 Archaeplastida
MA_1896g0010 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
Solyc06g083300.4.1 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
Solyc09g090940.3.1 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
Zm00001e008436_P002 No alias mRNA endoribonuclease (G3BP) 0.02 Archaeplastida
Zm00001e014590_P001 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
Zm00001e022613_P001 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
Zm00001e038048_P001 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
Zm00001e040697_P001 No alias mRNA endoribonuclease (G3BP) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002075 NTF2 19 137
IPR000504 RRM_dom 315 381
No external refs found!