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  5. Pp3c2_16780V3.1

Pp3c2_16780V3.1


Description : CTC-interacting domain 4


Gene families : OG0003256 (Archaeplastida) Phylogenetic Tree(s): OG0003256_tree ,
OG_05_0003358 (LandPlants) Phylogenetic Tree(s): OG_05_0003358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_16780V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00037850 evm_27.TU.AmTr_v1... Polyadenylate-binding protein-interacting protein 4... 0.01 Archaeplastida
AT3G14010 CID4 CTC-interacting domain 4 0.04 Archaeplastida
Gb_00770 No alias Polyadenylate-binding protein-interacting protein 4... 0.04 Archaeplastida
Gb_36727 No alias Polyadenylate-binding protein-interacting protein 4... 0.04 Archaeplastida
MA_10427918g0010 No alias Polyadenylate-binding protein-interacting protein 4... 0.03 Archaeplastida
MA_477524g0010 No alias Polyadenylate-binding protein-interacting protein 4... 0.02 Archaeplastida
Mp7g15450.1 No alias Polyadenylate-binding protein-interacting protein 4... 0.03 Archaeplastida
Solyc06g062860.4.1 No alias Polyadenylate-binding protein-interacting protein 4... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!