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  5. Pp3c2_17540V3.1

Pp3c2_17540V3.1


Description : TSPO(outer membrane tryptophan-rich sensory protein)-related


Gene families : OG0003242 (Archaeplastida) Phylogenetic Tree(s): OG0003242_tree ,
OG_05_0004213 (LandPlants) Phylogenetic Tree(s): OG_05_0004213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_17540V3.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g05930.1 No alias TSPO autophagosome autophagic adapter protein 0.04 Archaeplastida
MA_9106132g0010 No alias TSPO autophagosome autophagic adapter protein 0.02 Archaeplastida
Mp3g12180.1 No alias TSPO autophagosome autophagic adapter protein 0.11 Archaeplastida
Smo88870 No alias Vesicle trafficking.autophagosome formation.cargo... 0.05 Archaeplastida
Zm00001e027500_P001 No alias TSPO autophagosome autophagic adapter protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR004307 TspO_MBR 50 190
No external refs found!