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  5. Pp3c2_1920V3.1

Pp3c2_1920V3.1


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0002046 (Archaeplastida) Phylogenetic Tree(s): OG0002046_tree ,
OG_05_0001832 (LandPlants) Phylogenetic Tree(s): OG_05_0001832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_1920V3.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00101570 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G58510 No alias DEA(D/H)-box RNA helicase family protein 0.04 Archaeplastida
Cpa|evm.model.tig00020544.5 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.02 Archaeplastida
Cre10.g427700 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os03g59050.1 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os07g10250.1 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.03 Archaeplastida
MA_181586g0010 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.03 Archaeplastida
Solyc03g052980.3.1 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e011396_P001 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e011397_P001 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!