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  5. Pp3c2_20240V3.1

Pp3c2_20240V3.1


Description : indeterminate(ID)-domain 2


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_20240V3.1
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00098860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00057p00204520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT2G02080 IDD4, AtIDD4 indeterminate(ID)-domain 4 0.03 Archaeplastida
AT5G44160 NUC C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01003119001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01009680001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01025658001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_35984 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g14010.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g70870.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os08g44050.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
Solyc01g099340.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e003968_P002 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e004751_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034317_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!