1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c2_2740V3.1

Pp3c2_2740V3.1


Description : DNA-directed RNA polymerase, RBP11-like


Gene families : OG0001592 (Archaeplastida) Phylogenetic Tree(s): OG0001592_tree ,
OG_05_0004593 (LandPlants) Phylogenetic Tree(s): OG_05_0004593_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_2740V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00151710 evm_27.TU.AmTr_v1... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.05 Archaeplastida
Cpa|evm.model.tig00000403.66 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.01 Archaeplastida
Cpa|evm.model.tig00000704.49 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 Archaeplastida
LOC_Os12g09280.1 No alias subunit 11 of RNA polymerase 0.02 Archaeplastida
MA_199383g0010 No alias subunit 11 of RNA polymerase 0.03 Archaeplastida
MA_37522g0020 No alias subunit 11 of RNA polymerase 0.03 Archaeplastida
Zm00001e015116_P002 No alias subunit 11 of RNA polymerase 0.04 Archaeplastida
Zm00001e021398_P001 No alias subunit 11 of RNA polymerase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!