1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c2_3190V3.1

Pp3c2_3190V3.1


Description : ARM repeat superfamily protein


Gene families : OG0002775 (Archaeplastida) Phylogenetic Tree(s): OG0002775_tree ,
OG_05_0005830 (LandPlants) Phylogenetic Tree(s): OG_05_0005830_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_3190V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264760 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00058p00120430 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT2G34357 No alias ARM repeat superfamily protein 0.11 Archaeplastida
AT4G23540 No alias ARM repeat superfamily protein 0.11 Archaeplastida
Cpa|evm.model.tig00020554.42 No alias No description available 0.05 Archaeplastida
Cre19.g751197 No alias No description available 0.08 Archaeplastida
GSVIVT01023097001 No alias No description available 0.05 Archaeplastida
GSVIVT01033265001 No alias No description available 0.05 Archaeplastida
Gb_23183 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g72780.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os02g54110.1 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_10433024g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_55053g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g25050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo78845 No alias No description available 0.06 Archaeplastida
Solyc07g042380.4.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e016059_P003 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e018571_P003 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 356 557
No external refs found!