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  5. Pp3c2_4380V3.1

Pp3c2_4380V3.1


Description : Alanyl-tRNA synthetase, class IIc


Gene families : OG0001306 (Archaeplastida) Phylogenetic Tree(s): OG0001306_tree ,
OG_05_0001493 (LandPlants) Phylogenetic Tree(s): OG_05_0001493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_4380V3.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00214450 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
AT5G22800 EMB86, EMB1030, EMB263 Alanyl-tRNA synthetase, class IIc 0.08 Archaeplastida
Cre08.g368900 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
GSVIVT01023918001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 Archaeplastida
Gb_36215 No alias alanine-tRNA ligase 0.09 Archaeplastida
LOC_Os06g13660.1 No alias alanine-tRNA ligase 0.09 Archaeplastida
MA_10282308g0010 No alias alanine-tRNA ligase 0.05 Archaeplastida
MA_10436405g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc01g111990.3.1 No alias alanine-tRNA ligase 0.06 Archaeplastida
Zm00001e036036_P002 No alias alanine-tRNA ligase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042816 vitamin B6 metabolic process IEP Neighborhood
BP GO:0042819 vitamin B6 biosynthetic process IEP Neighborhood
BP GO:0042822 pyridoxal phosphate metabolic process IEP Neighborhood
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Neighborhood
BP GO:0046184 aldehyde biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!