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  5. Pp3c3_11530V3.1

Pp3c3_11530V3.1


Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0000163 (Archaeplastida) Phylogenetic Tree(s): OG0000163_tree ,
OG_05_0000066 (LandPlants) Phylogenetic Tree(s): OG_05_0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_11530V3.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_13940V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c11_21080V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c11_25610V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c12_3820V3.1 No alias Protein kinase family protein 0.02 Archaeplastida
Pp3c13_19900V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
Pp3c13_2610V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c13_2820V3.1 No alias Protein kinase superfamily protein 0.05 Archaeplastida
Pp3c14_12470V3.1 No alias MAPK/ERK kinase kinase 3 0.03 Archaeplastida
Pp3c14_13240V3.1 No alias Protein kinase family protein 0.04 Archaeplastida
Pp3c14_13600V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida
Pp3c15_16800V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c15_16810V3.1 No alias Protein kinase superfamily protein 0.04 Archaeplastida
Pp3c16_19550V3.1 No alias No annotation 0.08 Archaeplastida
Pp3c16_21740V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c17_21566V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida
Pp3c17_21730V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Archaeplastida
Pp3c17_22160V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c17_8750V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
Pp3c18_18616V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c18_22270V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c18_4910V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c20_20760V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
Pp3c20_22019V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c20_2990V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c21_11770V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c21_18280V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c21_3920V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Archaeplastida
Pp3c23_980V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 Archaeplastida
Pp3c25_5920V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
Pp3c2_13120V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c2_13130V3.1 No alias Protein kinase superfamily protein with... 0.03 Archaeplastida
Pp3c3_30860V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c3_30870V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
Pp3c3_30880V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c3_30890V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c6_5920V3.1 No alias Protein kinase family protein 0.03 Archaeplastida
Pp3c6_5930V3.1 No alias Protein kinase family protein 0.03 Archaeplastida
Pp3c7_17397V3.1 No alias Protein kinase superfamily protein with... 0.02 Archaeplastida
Pp3c9_24930V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c9_25020V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c9_9314V3.1 No alias Protein kinase superfamily protein 0.06 Archaeplastida
Pp3c9_9320V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 108 167
No external refs found!