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  5. Pp3c3_20200V3.1

Pp3c3_20200V3.1


Description : cullin4


Gene families : OG0001033 (Archaeplastida) Phylogenetic Tree(s): OG0001033_tree ,
OG_05_0004845 (LandPlants) Phylogenetic Tree(s): OG_05_0004845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_20200V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00163840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT5G46210 ATCUL4, CUL4 cullin4 0.03 Archaeplastida
GSVIVT01020008001 No alias Cullin-3A OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_27360 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.05 Archaeplastida
LOC_Os02g51180.1 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.02 Archaeplastida
MA_10432667g0020 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.02 Archaeplastida
MA_10436569g0010 No alias Cullin-3A OS=Arabidopsis thaliana (sp|q9zvh4|cul3a_arath : 422.0) 0.03 Archaeplastida
Mp1g07340.1 No alias scaffold component CUL4 of CUL4-DDB1 ubiquitination... 0.02 Archaeplastida
Mp4g12190.1 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.03 Archaeplastida
Smo98006 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Zm00001e005919_P001 No alias scaffold component CUL4 of CUL4-DDB1 ubiquitination... 0.03 Archaeplastida
Zm00001e021679_P001 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!