1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c3_21560V3.1

Pp3c3_21560V3.1


Description : RNA binding;abscisic acid binding


Gene families : OG0001519 (Archaeplastida) Phylogenetic Tree(s): OG0001519_tree ,
OG_05_0004668 (LandPlants) Phylogenetic Tree(s): OG_05_0004668_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_21560V3.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre03.g177200 No alias RNA-binding protein BRN1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_05124 No alias no description available(sp|b8bcz8|fca_orysi : 224.0) 0.02 Archaeplastida
Gb_06455 No alias RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10429234g0010 No alias RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g13560.1 No alias RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g007370.3.1 No alias no description available(sp|b8bcz8|fca_orysi : 191.0) 0.04 Archaeplastida
Zm00001e009433_P002 No alias no description available(sp|b8bcz8|fca_orysi : 625.0) 0.02 Archaeplastida
Zm00001e028353_P001 No alias RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!