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  5. Pp3c3_32550V3.1

Pp3c3_32550V3.1


Description : ribosome biogenesis regulatory protein (RRS1) family protein


Gene families : OG0004858 (Archaeplastida) Phylogenetic Tree(s): OG0004858_tree ,
OG_05_0005720 (LandPlants) Phylogenetic Tree(s): OG_05_0005720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_32550V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00122560 evm_27.TU.AmTr_v1... Ribosome biogenesis regulatory protein homolog... 0.04 Archaeplastida
Cre01.g020950 No alias Ribosome biogenesis regulatory protein homolog... 0.11 Archaeplastida
GSVIVT01027072001 No alias Ribosome biogenesis regulatory protein homolog... 0.09 Archaeplastida
Gb_41748 No alias component ARRS1 of ARPF2-ARRS1 complex 0.04 Archaeplastida
LOC_Os04g58830.1 No alias component ARRS1 of ARPF2-ARRS1 complex 0.07 Archaeplastida
Mp1g07840.1 No alias component ARRS1 of ARPF2-ARRS1 complex 0.09 Archaeplastida
Zm00001e016688_P001 No alias component ARRS1 of ARPF2-ARRS1 complex 0.04 Archaeplastida
Zm00001e025915_P002 No alias component ARRS1 of ARPF2-ARRS1 complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007023 Ribosom_reg 17 182
No external refs found!