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  5. Pp3c3_34840V3.1

Pp3c3_34840V3.1


Description : Ribosomal RNA adenine dimethylase family protein


Gene families : OG0002205 (Archaeplastida) Phylogenetic Tree(s): OG0002205_tree ,
OG_05_0002471 (LandPlants) Phylogenetic Tree(s): OG_05_0002471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_34840V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021348.95 No alias Ribosomal RNA small subunit methyltransferase... 0.01 Archaeplastida
Cre01.g042900 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
Gb_34275 No alias rRNA adenosine dimethylase (DIM1A) 0.03 Archaeplastida
Mp6g10100.1 No alias rRNA adenosine dimethylase (DIM1A) 0.02 Archaeplastida
Solyc01g100430.3.1 No alias rRNA adenosine dimethylase (DIM1A) 0.05 Archaeplastida
Zm00001e013790_P001 No alias rRNA adenosine dimethylase (DIM1A) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!