1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c4_15250V3.1

Pp3c4_15250V3.1


Description : Ribosomal protein S19 family protein


Gene families : OG0002089 (Archaeplastida) Phylogenetic Tree(s): OG0002089_tree ,
OG_05_0085587 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_15250V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00076070 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
AT1G04270 RPS15 cytosolic ribosomal protein S15 0.29 Archaeplastida
AT5G09500 No alias Ribosomal protein S19 family protein 0.02 Archaeplastida
AT5G09510 No alias Ribosomal protein S19 family protein 0.28 Archaeplastida
Cpa|evm.model.tig00020830.61 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 Archaeplastida
Cre08.g360900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.33 Archaeplastida
GSVIVT01000754001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 Archaeplastida
GSVIVT01018113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.28 Archaeplastida
Gb_16516 No alias component RPS15 of SSU proteome 0.13 Archaeplastida
Gb_36524 No alias component RPS15 of SSU proteome 0.13 Archaeplastida
LOC_Os03g58430.1 No alias component RPS15 of SSU proteome 0.3 Archaeplastida
LOC_Os07g08660.1 No alias component RPS15 of SSU proteome 0.27 Archaeplastida
MA_14543g0010 No alias component RPS15 of SSU proteome 0.08 Archaeplastida
MA_18691g0010 No alias 40S ribosomal protein S15 OS=Picea mariana... 0.15 Archaeplastida
Mp3g15000.1 No alias component RPS15 of SSU proteome 0.3 Archaeplastida
Pp3c12_9180V3.1 No alias Ribosomal protein S19 family protein 0.25 Archaeplastida
Smo172403 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Solyc02g082000.3.1 No alias component RPS15 of SSU proteome 0.28 Archaeplastida
Solyc09g083370.3.1 No alias component RPS15 of SSU proteome 0.28 Archaeplastida
Zm00001e011449_P001 No alias component RPS15 of SSU proteome 0.29 Archaeplastida
Zm00001e011450_P001 No alias component RPS15 of SSU proteome 0.13 Archaeplastida
Zm00001e032961_P001 No alias component RPS15 of SSU proteome 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!