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  5. Pp3c5_12340V3.1

Pp3c5_12340V3.1


Description : RING/U-box superfamily protein with ARM repeat domain


Gene families : OG0002359 (Archaeplastida) Phylogenetic Tree(s): OG0002359_tree ,
OG_05_0001618 (LandPlants) Phylogenetic Tree(s): OG_05_0001618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_12340V3.1
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00049340 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00155p00026110 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT5G67340 No alias ARM repeat superfamily protein 0.03 Archaeplastida
GSVIVT01000169001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Solyc01g014230.4.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e019045_P001 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!