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  5. Pp3c5_16520V3.1

Pp3c5_16520V3.1


Description : Ankyrin repeat family protein


Gene families : OG0006552 (Archaeplastida) Phylogenetic Tree(s): OG0006552_tree ,
OG_05_0006851 (LandPlants) Phylogenetic Tree(s): OG_05_0006851_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_16520V3.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT1G50900 GDC1 Ankyrin repeat family protein 0.12 Archaeplastida
Cre12.g551950 No alias Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01002001001 No alias Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.13 Archaeplastida
Gb_05109 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g33660.1 No alias SRP insertion system TIC-to-SRP handover factor (LTD) 0.05 Archaeplastida
Mp3g06400.1 No alias SRP insertion system TIC-to-SRP handover factor (LTD) 0.1 Archaeplastida
Smo228083 No alias Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e035117_P001 No alias SRP insertion system TIC-to-SRP handover factor (LTD) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!