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  5. Pp3c5_22280V3.1

Pp3c5_22280V3.1


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_22280V3.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01022109001 No alias No description available 0.02 Archaeplastida
GSVIVT01028316001 No alias No description available 0.02 Archaeplastida
LOC_Os01g46870.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g32620.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os05g36100.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Pp3c11_23290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c13_4270V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_13280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c5_810V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c6_19350V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.01 Archaeplastida
Solyc06g063070.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc09g066360.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!