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  5. Pp3c5_23290V3.1

Pp3c5_23290V3.1


Description : TRICHOME BIREFRINGENCE-LIKE 25


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0018922 (LandPlants) Phylogenetic Tree(s): OG_05_0018922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_23290V3.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00112880 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.03 Archaeplastida
GSVIVT01018511001 No alias Protein trichome birefringence-like 18 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g49660.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g089670.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e015715_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!