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  5. Pp3c5_4110V3.1

Pp3c5_4110V3.1


Description : photosystem II subunit QA


Gene families : OG0001933 (Archaeplastida) Phylogenetic Tree(s): OG0001933_tree ,
OG_05_0005846 (LandPlants) Phylogenetic Tree(s): OG_05_0005846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_4110V3.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00134700 evm_27.TU.AmTr_v1... No description available 0.1 Archaeplastida
AMTR_s00098p00154060 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 Archaeplastida
AMTR_s00098p00157610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.15 Archaeplastida
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.21 Archaeplastida
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.05 Archaeplastida
Cre08.g372450 No alias Oxygen-evolving enhancer protein 3, chloroplastic... 0.21 Archaeplastida
GSVIVT01002809001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.12 Archaeplastida
GSVIVT01014586001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.02 Archaeplastida
Gb_04734 No alias component PsbQ of PS-II oxygen-evolving center 0.09 Archaeplastida
LOC_Os07g01480.1 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.03 Archaeplastida
LOC_Os07g36080.1 No alias component PsbQ of PS-II oxygen-evolving center 0.13 Archaeplastida
MA_218996g0010 No alias component PsbQ of PS-II oxygen-evolving center 0.08 Archaeplastida
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.19 Archaeplastida
Smo106248 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 Archaeplastida
Solyc02g079950.3.1 No alias component PsbQ of PS-II oxygen-evolving center 0.08 Archaeplastida
Solyc10g006530.4.1 No alias Photosynthetic NDH subunit of lumenal location 3,... 0.02 Archaeplastida
Zm00001e010513_P001 No alias component PsbQ of PS-II oxygen-evolving center 0.14 Archaeplastida
Zm00001e032657_P001 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.09 Archaeplastida
Zm00001e035180_P001 No alias no hits & (original description: none) 0.15 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!