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  5. AT4G38180

AT4G38180 (FRS5)


Aliases : FRS5

Description : FAR1-related sequence 5


Gene families : OG0000638 (Archaeplastida) Phylogenetic Tree(s): OG0000638_tree ,
OG_05_0000359 (LandPlants) Phylogenetic Tree(s): OG_05_0000359_tree ,
OG_06_0000420 (SeedPlants) Phylogenetic Tree(s): OG_06_0000420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38180
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030079001 No alias RNA biosynthesis.transcriptional activation.FAR1... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009639 response to red or far red light ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0001709 cell fate determination IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
BP GO:0010076 maintenance of floral meristem identity IEP Neighborhood
BP GO:0010077 maintenance of inflorescence meristem identity IEP Neighborhood
BP GO:0010257 NADH dehydrogenase complex assembly IEP Neighborhood
BP GO:0010492 maintenance of shoot apical meristem identity IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0031519 PcG protein complex IEP Neighborhood
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Neighborhood
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Neighborhood
CC GO:0035102 PRC1 complex IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
MF GO:0052381 tRNA dimethylallyltransferase activity IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 88 179
IPR018289 MULE_transposase_dom 300 392
IPR007527 Znf_SWIM 568 614
No external refs found!