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  5. Pp3c6_16660V3.1

Pp3c6_16660V3.1


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_16660V3.1
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00010p00098700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00010p00099690 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.03 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00021p00185480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00057p00191330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AMTR_s00068p00102110 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 Archaeplastida
AMTR_s00069p00132820 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 Archaeplastida
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00069p00141520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00129p00119770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.04 Archaeplastida
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G43160 RAP2.6 related to AP2 6 0.02 Archaeplastida
AT1G46768 RAP2.1 related to AP2 1 0.01 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.02 Archaeplastida
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G25490 DREB1B, ATCBF1, CBF1 C-repeat/DRE binding factor 1 0.01 Archaeplastida
AT4G27950 CRF4 cytokinin response factor 4 0.02 Archaeplastida
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G34410 RRTF1 redox responsive transcription factor 1 0.04 Archaeplastida
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.02 Archaeplastida
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01006277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013934001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01015540001 No alias Cell wall.cutin and suberin.biosynthesis... 0.02 Archaeplastida
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01021060001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01022277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_01210 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_01212 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_01213 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_01215 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_01217 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_02790 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07474 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07949 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.02 Archaeplastida
Gb_10809 No alias transcription factor (ERF). transcription factor (ERN1) 0.01 Archaeplastida
Gb_24328 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26067 No alias transcription factor (ERF) 0.01 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26855 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26856 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26857 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26858 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26863 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_32532 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os01g07120.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os01g64790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os01g66270.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g06330.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g13710.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g45450.1 No alias Dehydration-responsive element-binding protein 1G... 0.04 Archaeplastida
LOC_Os02g52670.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g22170.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os04g52090.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os05g41780.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os05g49010.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g35240.1 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
LOC_Os08g36920.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os09g11480.2 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
LOC_Os09g28440.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_10031781g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_10242823g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10274g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_1037g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10427586g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434101g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10434489g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_116185g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_132427g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_134453g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_164803g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_18403g0020 No alias Ethylene-responsive transcription factor RAP2-4... 0.01 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_2446g0010 No alias Ethylene-responsive transcription factor ERF053... 0.01 Archaeplastida
MA_288689g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_3405g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_411387g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_420358g0010 No alias Ethylene-responsive transcription factor 1A... 0.02 Archaeplastida
MA_428433g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_4481564g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4929994g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_502153g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_912855g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_9260020g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
MA_9588449g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp6g04880.1 No alias Ethylene-responsive transcription factor ERF008... 0.02 Archaeplastida
Mp7g09350.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c13_24020V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c19_6370V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c22_1800V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c3_33930V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_23930V3.1 No alias ethylene responsive element binding factor 1 0.03 Archaeplastida
Pp3c7_20200V3.1 No alias ethylene responsive element binding factor 2 0.01 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.02 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc01g108240.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc02g090770.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005500.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc03g093610.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g095977.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc03g117130.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc04g051360.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g071770.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc06g054630.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc06g065820.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g007820.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc08g007830.1.1 No alias Dehydration-responsive element-binding protein 1F... 0.04 Archaeplastida
Solyc08g007835.1.1 No alias No annotation 0.03 Archaeplastida
Solyc09g091950.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g050970.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc10g078610.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e008306_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.02 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e026989_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e036130_P001 No alias transcription factor (DREB) 0.01 Archaeplastida
Zm00001e036201_P001 No alias Ethylene-responsive transcription factor ERF014... 0.02 Archaeplastida
Zm00001e037241_P001 No alias transcription factor (DREB) 0.01 Archaeplastida
Zm00001e039555_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e040879_P001 No alias Ethylene-responsive transcription factor RAP2-6... 0.01 Archaeplastida
Zm00001e041539_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!