AT4G38710

Description : glycine-rich protein

Gene families : OG0001866 (Archaeplastida) Phylogenetic Tree(s): OG0001866_tree ,
OG_05_0001421 (LandPlants) Phylogenetic Tree(s): OG_05_0001421_tree ,
OG_06_0001509 (SeedPlants) Phylogenetic Tree(s): OG_06_0001509_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G38710
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00114p00018640	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation initiation.mRNA...	0.02	Archaeplastida
AT1G13020	EIF4B2	eukaryotic initiation factor 4B2	0.06	Archaeplastida
GSVIVT01024072001	No alias	Protein biosynthesis.translation initiation.mRNA...	0.04	Archaeplastida
Smo422547	No alias	Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum	0.05	Archaeplastida
Solyc05g013700.4.1	No alias	mRNA unwinding factor (eIF4B)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004072	aspartate kinase activity	IEP	Neighborhood
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0016556	mRNA modification	IEP	Neighborhood
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Neighborhood
MF	GO:0019202	amino acid kinase activity	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR010433	EIF-4B_pln	6	345

External Links

No external refs found!