AT4G38840

Description : SAUR-like auxin-responsive protein family

Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0000013 (LandPlants) Phylogenetic Tree(s): OG_05_0000013_tree ,
OG_06_0000016 (SeedPlants) Phylogenetic Tree(s): OG_06_0000016_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G38840
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00264610	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AT2G18010	No alias	SAUR-like auxin-responsive protein family	0.03	Archaeplastida
AT4G36110	No alias	SAUR-like auxin-responsive protein family	0.08	Archaeplastida
GSVIVT01015021001	No alias	No description available	0.06	Archaeplastida
GSVIVT01019093001	No alias	Auxin-induced protein X10A OS=Glycine max	0.04	Archaeplastida
GSVIVT01019095001	No alias	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana	0.08	Archaeplastida
GSVIVT01019096001	No alias	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana	0.1	Archaeplastida
GSVIVT01019097001	No alias	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana	0.09	Archaeplastida
GSVIVT01019099001	No alias	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana	0.09	Archaeplastida
GSVIVT01019101001	No alias	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana	0.07	Archaeplastida
GSVIVT01019103001	No alias	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana	0.08	Archaeplastida
GSVIVT01024125001	No alias	Auxin-induced protein X15 OS=Glycine max	0.06	Archaeplastida
GSVIVT01024126001	No alias	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01024127001	No alias	Auxin-induced protein 15A OS=Glycine max	0.03	Archaeplastida
GSVIVT01024128001	No alias	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana	0.09	Archaeplastida
GSVIVT01024130001	No alias	Auxin-induced protein 10A5 OS=Glycine max	0.07	Archaeplastida
GSVIVT01024134001	No alias	Auxin-induced protein 15A OS=Glycine max	0.02	Archaeplastida
GSVIVT01024136001	No alias	Auxin-induced protein 15A OS=Glycine max	0.02	Archaeplastida
Gb_12165	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Gb_12167	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_15664	No alias	no description available(sp\|q9sl45\|sau10_arath : 98.6)	0.04	Archaeplastida
Gb_18130	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_20563	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Gb_29890	No alias	Auxin-induced protein 6B OS=Glycine max...	0.02	Archaeplastida
Gb_29893	No alias	Indole-3-acetic acid-induced protein ARG7 OS=Vigna...	0.05	Archaeplastida
Gb_32845	No alias	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os02g24700.1	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os02g24740.1	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os02g42990.1	No alias	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os06g48850.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os06g50040.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os12g41600.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10205229g0010	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10428249g0010	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10431311g0010	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10431652g0010	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_11735g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_16043g0010	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_372975g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_6336770g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_676323g0010	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_75109g0010	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_80409g0010	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_94838g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp4g16840.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c13_3260V3.1	No alias	SAUR-like auxin-responsive protein family	0.02	Archaeplastida
Pp3c25_12120V3.1	No alias	SAUR-like auxin-responsive protein family	0.03	Archaeplastida
Smo418753	No alias	No description available	0.03	Archaeplastida
Solyc01g091030.3.1	No alias	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc01g110590.4.1	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc01g110610.4.1	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Solyc01g110630.4.1	No alias	Auxin-induced protein 15A OS=Glycine max...	0.05	Archaeplastida
Solyc01g110680.4.1	No alias	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Solyc01g110770.2.1	No alias	Auxin-induced protein 15A OS=Glycine max...	0.03	Archaeplastida
Solyc01g110780.1.1	No alias	Auxin-induced protein 15A OS=Glycine max...	0.14	Archaeplastida
Solyc01g110790.3.1	No alias	Auxin-induced protein 15A OS=Glycine max...	0.06	Archaeplastida
Solyc01g110860.1.1	No alias	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc01g110870.3.1	No alias	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc01g110900.1.1	No alias	Indole-3-acetic acid-induced protein ARG7 OS=Vigna...	0.05	Archaeplastida
Solyc01g110903.1.1	No alias	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc01g110940.3.1	No alias	Auxin-induced protein 15A OS=Glycine max...	0.04	Archaeplastida
Solyc03g033590.1.1	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc03g082530.1.1	No alias	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc04g052970.3.1	No alias	Indole-3-acetic acid-induced protein ARG7 OS=Vigna...	0.04	Archaeplastida
Solyc08g150103.1.1	No alias	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc10g052540.1.1	No alias	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Solyc10g052580.3.1	No alias	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc10g054720.1.1	No alias	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc11g011650.1.1	No alias	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc11g011680.1.1	No alias	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e004043_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e013184_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e034247_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e034248_P002	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e041324_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009409	response to cold	RCA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003727	single-stranded RNA binding	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
CC	GO:0009526	plastid envelope	IEP	Neighborhood
CC	GO:0009528	plastid inner membrane	IEP	Neighborhood
BP	GO:0009657	plastid organization	IEP	Neighborhood
BP	GO:0009658	chloroplast organization	IEP	Neighborhood
CC	GO:0009706	chloroplast inner membrane	IEP	Neighborhood
BP	GO:0009741	response to brassinosteroid	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0009902	chloroplast relocation	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
CC	GO:0009941	chloroplast envelope	IEP	Neighborhood
BP	GO:0009965	leaf morphogenesis	IEP	Neighborhood
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Neighborhood
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010628	positive regulation of gene expression	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
BP	GO:0015994	chlorophyll metabolic process	IEP	Neighborhood
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0019750	chloroplast localization	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
CC	GO:0031967	organelle envelope	IEP	Neighborhood
CC	GO:0031969	chloroplast membrane	IEP	Neighborhood
CC	GO:0031975	envelope	IEP	Neighborhood
BP	GO:0032069	regulation of nuclease activity	IEP	Neighborhood
BP	GO:0032074	negative regulation of nuclease activity	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
CC	GO:0042170	plastid membrane	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0042793	plastid transcription	IEP	Neighborhood
BP	GO:0043086	negative regulation of catalytic activity	IEP	Neighborhood
BP	GO:0044092	negative regulation of molecular function	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
CC	GO:0044434	chloroplast part	IEP	Neighborhood
CC	GO:0044435	plastid part	IEP	Neighborhood
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046148	pigment biosynthetic process	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051336	regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0051644	plastid localization	IEP	Neighborhood
BP	GO:0051656	establishment of organelle localization	IEP	Neighborhood
BP	GO:0051667	establishment of plastid localization	IEP	Neighborhood
BP	GO:0060700	regulation of ribonuclease activity	IEP	Neighborhood
BP	GO:0060701	negative regulation of ribonuclease activity	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
BP	GO:0080086	stamen filament development	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1901917	regulation of exoribonuclease activity	IEP	Neighborhood
BP	GO:1901918	negative regulation of exoribonuclease activity	IEP	Neighborhood
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905777	regulation of exonuclease activity	IEP	Neighborhood
BP	GO:1905778	negative regulation of exonuclease activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003676	SAUR_fam	12	95

External Links

No external refs found!

AT4G38840

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation