Pp3c6_28290V3.1


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_28290V3.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.03 Archaeplastida
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013914001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013917001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013920001 No alias No description available 0.01 Archaeplastida
GSVIVT01013923001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013929001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013934001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01015540001 No alias Cell wall.cutin and suberin.biosynthesis... 0.01 Archaeplastida
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01021060001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01022076001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.02 Archaeplastida
GSVIVT01035098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01035852001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Gb_01213 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_02790 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_24328 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_29220 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_29359 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g45450.1 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46240.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os04g52090.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os08g41030.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g11460.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
LOC_Os10g41330.1 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_100577g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10242823g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10430769g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10436654g0010 No alias Ethylene-responsive transcription factor ERF018... 0.02 Archaeplastida
MA_130669g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_134453g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_164803g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_16778g0010 No alias transcription factor (DREB) 0.01 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_287886g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_288689g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_502153g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_67841g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_7850076g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_78784g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_82481g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_844983g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_914123g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_9260020g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9565555g0010 No alias Ethylene-responsive transcription factor ERF016... 0.02 Archaeplastida
Mp5g02590.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Mp7g09350.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp7g13760.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Pp3c13_24020V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c14_9940V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_5010V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c25_4250V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c26_1890V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Pp3c7_20200V3.1 No alias ethylene responsive element binding factor 2 0.02 Archaeplastida
Solyc01g065980.4.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc02g067020.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 Archaeplastida
Solyc03g093550.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.02 Archaeplastida
Solyc04g051360.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc05g052040.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc10g009110.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006692_P001 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e006753_P003 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e013096_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.03 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e023686_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
Zm00001e023804_P001 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025840_P001 No alias transcription factor (DREB) 0.01 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.03 Archaeplastida
Zm00001e032032_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e034242_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e034741_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Zm00001e036201_P001 No alias Ethylene-responsive transcription factor ERF014... 0.02 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e037869_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e041781_P001 No alias transcription factor (DREB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!