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  5. AT4G39220

AT4G39220 (ATRER1A)


Aliases : ATRER1A

Description : Rer1 family protein


Gene families : OG0001249 (Archaeplastida) Phylogenetic Tree(s): OG0001249_tree ,
OG_05_0001860 (LandPlants) Phylogenetic Tree(s): OG_05_0001860_tree ,
OG_06_0001876 (SeedPlants) Phylogenetic Tree(s): OG_06_0001876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39220
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00210110 evm_27.TU.AmTr_v1... Protein RER1A OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00020710.65 No alias Protein RER1C OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_10400 No alias Protein RER1A OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_36826g0020 No alias Protein RER1B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp2g00750.1 No alias Protein RER1A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c19_21230V3.1 No alias Rer1 family protein 0.02 Archaeplastida
Smo438307 No alias Protein RER1A OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc01g109770.3.1 No alias Protein RER1B OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e017155_P001 No alias Protein RER1A OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e025626_P001 No alias Protein RER1A OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IMP Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0000254 C-4 methylsterol oxidase activity IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002229 defense response to oomycetes IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Neighborhood
MF GO:0005261 cation channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
CC GO:0005623 cell IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
MF GO:0008805 carbon-monoxide oxygenase activity IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0009903 chloroplast avoidance movement IEP Neighborhood
BP GO:0010064 embryonic shoot morphogenesis IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016622 oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0017057 6-phosphogluconolactonase activity IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
MF GO:0019107 myristoyltransferase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
MF GO:0030276 clathrin binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035966 response to topologically incorrect protein IEP Neighborhood
BP GO:0042126 nitrate metabolic process IEP Neighborhood
BP GO:0042128 nitrate assimilation IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0046519 sphingoid metabolic process IEP Neighborhood
BP GO:0046520 sphingoid biosynthetic process IEP Neighborhood
BP GO:0046835 carbohydrate phosphorylation IEP Neighborhood
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP Neighborhood
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0051766 inositol trisphosphate kinase activity IEP Neighborhood
BP GO:0051775 response to redox state IEP Neighborhood
BP GO:0051788 response to misfolded protein IEP Neighborhood
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Neighborhood
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Neighborhood
BP GO:0052746 inositol phosphorylation IEP Neighborhood
BP GO:0071461 cellular response to redox state IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
BP GO:0080065 4-alpha-methyl-delta7-sterol oxidation IEP Neighborhood
BP GO:0080129 proteasome core complex assembly IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
BP GO:2001057 reactive nitrogen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004932 Rer1 19 181
No external refs found!