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  5. Pp3c7_14180V3.1

Pp3c7_14180V3.1


Description : SEC7-like guanine nucleotide exchange family protein


Gene families : OG0001057 (Archaeplastida) Phylogenetic Tree(s): OG0001057_tree ,
OG_05_0002382 (LandPlants) Phylogenetic Tree(s): OG_05_0002382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_14180V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00145310 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
AMTR_s00041p00031550 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.11 Archaeplastida
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.11 Archaeplastida
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.14 Archaeplastida
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.15 Archaeplastida
Cpa|evm.model.tig00000852.23 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre09.g390319 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
GSVIVT01014993001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 Archaeplastida
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 Archaeplastida
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.12 Archaeplastida
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 Archaeplastida
Gb_07642 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.1 Archaeplastida
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 Archaeplastida
LOC_Os03g14260.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.14 Archaeplastida
LOC_Os06g41780.2 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 Archaeplastida
LOC_Os07g37750.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.17 Archaeplastida
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 Archaeplastida
MA_20138g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
Mp7g11590.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.12 Archaeplastida
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.13 Archaeplastida
Smo173646 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Smo85621 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
Solyc01g091460.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.16 Archaeplastida
Solyc01g112350.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.11 Archaeplastida
Solyc12g017830.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.13 Archaeplastida
Zm00001e001058_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.16 Archaeplastida
Zm00001e010568_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.17 Archaeplastida
Zm00001e035267_P004 No alias No annotation 0.17 Archaeplastida
Zm00001e037574_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!