AT1G03000 (PEX6)


Aliases : PEX6

Description : peroxin 6


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0006633 (LandPlants) Phylogenetic Tree(s): OG_05_0006633_tree ,
OG_06_0006866 (SeedPlants) Phylogenetic Tree(s): OG_06_0006866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G03000
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00152530 evm_27.TU.AmTr_v1... Protein translocation.peroxisome.importomer... 0.03 Archaeplastida
AMTR_s00040p00198390 evm_27.TU.AmTr_v1... Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.05 Archaeplastida
Cpa|evm.model.tig00000525.10 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
LOC_Os08g44240.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.02 Archaeplastida
Mp6g06650.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.04 Archaeplastida
Pp3c17_21090V3.1 No alias peroxin 6 0.02 Archaeplastida
Pp3c18_11480V3.1 No alias cell division cycle 48C 0.02 Archaeplastida
Pp3c8_20390V3.1 No alias peroxisome 1 0.02 Archaeplastida
Smo111871 No alias Protein translocation.peroxisome.importomer... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
BP GO:0006635 fatty acid beta-oxidation IMP Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0016558 protein import into peroxisome matrix IMP Interproscan
MF GO:0016887 ATPase activity ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0000578 embryonic axis specification IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004156 dihydropteroate synthase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005034 osmosensor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006360 transcription by RNA polymerase I IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006885 regulation of pH IEP Neighborhood
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006896 Golgi to vacuole transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008187 poly-pyrimidine tract binding IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008266 poly(U) RNA binding IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
MF GO:0009884 cytokinin receptor activity IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009942 longitudinal axis specification IEP Neighborhood
BP GO:0009945 radial axis specification IEP Neighborhood
BP GO:0009954 proximal/distal pattern formation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010216 maintenance of DNA methylation IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010271 regulation of chlorophyll catabolic process IEP Neighborhood
MF GO:0010348 lithium:proton antiporter activity IEP Neighborhood
BP GO:0010352 lithium ion export across the plasma membrane IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016208 AMP binding IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016929 SUMO-specific protease activity IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0030641 regulation of cellular pH IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034756 regulation of iron ion transport IEP Neighborhood
BP GO:0034757 negative regulation of iron ion transport IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0042780 tRNA 3'-end processing IEP Neighborhood
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043271 negative regulation of ion transport IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0043628 ncRNA 3'-end processing IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
BP GO:0043971 histone H3-K18 acetylation IEP Neighborhood
BP GO:0043972 histone H3-K23 acetylation IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044030 regulation of DNA methylation IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044154 histone H3-K14 acetylation IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051051 negative regulation of transport IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0051453 regulation of intracellular pH IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0055067 monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0070417 cellular response to cold IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080171 lytic vacuole organization IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090342 regulation of cell aging IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:0140115 export across plasma membrane IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 694 826
IPR003959 ATPase_AAA_core 380 533
No external refs found!