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  5. Pp3c7_20570V3.1

Pp3c7_20570V3.1


Description : HMG (high mobility group) box protein


Gene families : OG0002362 (Archaeplastida) Phylogenetic Tree(s): OG0002362_tree ,
OG_05_0006706 (LandPlants) Phylogenetic Tree(s): OG_05_0006706_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_20570V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00057150 evm_27.TU.AmTr_v1... High mobility group B protein 6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G11080 No alias HMG (high mobility group) box protein 0.03 Archaeplastida
AT4G23800 No alias HMG (high mobility group) box protein 0.09 Archaeplastida
GSVIVT01019504001 No alias High mobility group B protein 13 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_00374 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os02g15810.1 No alias High mobility group B protein 13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_783123g0010 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g12330.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Smo73858 No alias High mobility group B protein 6 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc08g082070.3.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e014266_P001 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
CC GO:0042555 MCM complex IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051095 regulation of helicase activity IEP Neighborhood
BP GO:0051097 negative regulation of helicase activity IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:1905462 regulation of DNA duplex unwinding IEP Neighborhood
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Neighborhood
BP GO:1905774 regulation of DNA helicase activity IEP Neighborhood
BP GO:1905775 negative regulation of DNA helicase activity IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!