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  5. Pp3c7_20710V3.1

Pp3c7_20710V3.1


Description : YELLOW STRIPE like 6


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0000331 (LandPlants) Phylogenetic Tree(s): OG_05_0000331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_20710V3.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.01 Archaeplastida
AMTR_s00103p00133280 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.05 Archaeplastida
AMTR_s00103p00133560 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AMTR_s00154p00064550 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 Archaeplastida
GSVIVT01012035001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01019645001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Gb_39396 No alias iron chelator transporter (YSL) 0.02 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
LOC_Os01g13710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
LOC_Os02g02450.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
LOC_Os02g42220.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
LOC_Os04g32050.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
LOC_Os04g32060.2 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
LOC_Os04g44320.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os04g45900.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.08 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.03 Archaeplastida
Solyc03g031920.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Solyc09g074960.1.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e008357_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Zm00001e023053_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Zm00001e031577_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.01 Archaeplastida
Zm00001e033936_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!