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Description : Hyaluronan / mRNA binding family
Gene families : OG0002128 (Archaeplastida) Phylogenetic Tree(s): OG0002128_tree ,
OG_05_0001404 (LandPlants) Phylogenetic Tree(s): OG_05_0001404_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c7_26560V3.1 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G17520 | No alias | Hyaluronan / mRNA binding family | 0.06 | Archaeplastida | |
| AT5G47210 | No alias | Hyaluronan / mRNA binding family | 0.07 | Archaeplastida | |
| GSVIVT01002125001 | No alias | RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
| GSVIVT01018290001 | No alias | RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana | 0.09 | Archaeplastida | |
| LOC_Os01g41880.1 | No alias | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.03 | Archaeplastida | |
| LOC_Os01g52390.1 | No alias | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.01 | Archaeplastida | |
| MA_10428060g0020 | No alias | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.02 | Archaeplastida | |
| MA_141447g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_9567870g0010 | No alias | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.04 | Archaeplastida | |
| Mp4g04410.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e019955_P001 | No alias | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.05 | Archaeplastida | |
| Zm00001e019958_P002 | No alias | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.02 | Archaeplastida | |
| Zm00001e026661_P002 | No alias | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Neighborhood |
| MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005730 | nucleolus | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Neighborhood |
| BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
| BP | GO:0009112 | nucleobase metabolic process | IEP | Neighborhood |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0046112 | nucleobase biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |