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  5. Pp3c7_6980V3.1

Pp3c7_6980V3.1


Description : thylakoid lumen 18.3 kDa protein


Gene families : OG0006940 (Archaeplastida) Phylogenetic Tree(s): OG0006940_tree ,
OG_05_0008250 (LandPlants) Phylogenetic Tree(s): OG_05_0008250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_6980V3.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00126870 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.18 Archaeplastida
AT1G54780 TLP18.3 thylakoid lumen 18.3 kDa protein 0.14 Archaeplastida
Cre03.g182150 No alias Photosynthesis.photophosphorylation.photosystem... 0.17 Archaeplastida
GSVIVT01000004001 No alias Photosynthesis.photophosphorylation.photosystem... 0.08 Archaeplastida
LOC_Os05g33280.1 No alias Psb32 protein involved in PS-II assembly 0.14 Archaeplastida
MA_10433010g0010 No alias Psb32 protein involved in PS-II assembly 0.04 Archaeplastida
Mp8g16080.1 No alias Psb32 protein involved in PS-II assembly 0.25 Archaeplastida
Smo127459 No alias Photosynthesis.photophosphorylation.photosystem... 0.14 Archaeplastida
Solyc01g098640.3.1 No alias Psb32 protein involved in PS-II assembly 0.13 Archaeplastida
Zm00001e026820_P001 No alias Psb32 protein involved in PS-II assembly 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!