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  5. Pp3c7_9140V3.1

Pp3c7_9140V3.1


Description : RAN GTPase activating protein 1


Gene families : OG0002548 (Archaeplastida) Phylogenetic Tree(s): OG0002548_tree ,
OG_05_0002456 (LandPlants) Phylogenetic Tree(s): OG_05_0002456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_9140V3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G63130 RANGAP1, ATRANGAP1 RAN GTPase activating protein 1 0.1 Archaeplastida
GSVIVT01011081001 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_83167g0010 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.05 Archaeplastida
Solyc01g079680.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.04 Archaeplastida
Solyc09g065190.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.07 Archaeplastida
Zm00001e015119_P001 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!