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  5. Pp3c8_15020V3.1

Pp3c8_15020V3.1


Description : chloroplast thylakoid lumen protein


Gene families : OG0006774 (Archaeplastida) Phylogenetic Tree(s): OG0006774_tree ,
OG_05_0006039 (LandPlants) Phylogenetic Tree(s): OG_05_0006039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_15020V3.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00252900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
AT4G02530 No alias chloroplast thylakoid lumen protein 0.11 Archaeplastida
Cre06.g256250 No alias Photosynthesis.photophosphorylation.photosystem... 0.1 Archaeplastida
GSVIVT01015564001 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 Archaeplastida
Gb_39226 No alias photosynthetic acclimation MPH2 acclimation factor 0.02 Archaeplastida
Gb_41224 No alias photosynthetic acclimation MPH2 acclimation factor 0.05 Archaeplastida
LOC_Os06g49160.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.12 Archaeplastida
MA_4765g0010 No alias photosynthetic acclimation MPH2 acclimation factor 0.05 Archaeplastida
MA_58974g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp7g01620.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.1 Archaeplastida
Pp3c24_6770V3.1 No alias chloroplast thylakoid lumen protein 0.02 Archaeplastida
Smo412250 No alias Photosynthesis.photophosphorylation.photosystem... 0.09 Archaeplastida
Solyc12g009600.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e013209_P001 No alias photosynthetic acclimation MPH2 acclimation factor 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!