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  5. Pp3c8_1610V3.1

Pp3c8_1610V3.1


Description : Ribosomal protein L1p/L10e family


Gene families : OG0002233 (Archaeplastida) Phylogenetic Tree(s): OG0002233_tree ,
OG_05_0002168 (LandPlants) Phylogenetic Tree(s): OG_05_0002168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_1610V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G06380 No alias Ribosomal protein L1p/L10e family 0.08 Archaeplastida
AT2G42650 No alias Ribosomal protein L1p/L10e family 0.06 Archaeplastida
AT3G58660 No alias Ribosomal protein L1p/L10e family 0.07 Archaeplastida
Cre07.g314100 No alias No description available 0.05 Archaeplastida
GSVIVT01000789001 No alias No description available 0.13 Archaeplastida
Gb_25959 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_173360g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_550291g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_9529545g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g11260.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc01g111420.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc04g008790.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026491_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032390_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 43 253
No external refs found!