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Description : BEST Arabidopsis thaliana protein match is: poly(A) polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0010156 (Archaeplastida) Phylogenetic Tree(s): OG0010156_tree ,
OG_05_0009853 (LandPlants) Phylogenetic Tree(s): OG_05_0009853_tree ,
OG_06_0009147 (SeedPlants) Phylogenetic Tree(s): OG_06_0009147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G02670 | |
| Cluster | HCCA: Cluster_12 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000280 | nuclear division | IEP | Neighborhood |
| CC | GO:0000811 | GINS complex | IEP | Neighborhood |
| BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | Neighborhood |
| BP | GO:0002683 | negative regulation of immune system process | IEP | Neighborhood |
| BP | GO:0002832 | negative regulation of response to biotic stimulus | IEP | Neighborhood |
| MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
| MF | GO:0004750 | ribulose-phosphate 3-epimerase activity | IEP | Neighborhood |
| MF | GO:0004789 | thiamine-phosphate diphosphorylase activity | IEP | Neighborhood |
| MF | GO:0004834 | tryptophan synthase activity | IEP | Neighborhood |
| BP | GO:0006089 | lactate metabolic process | IEP | Neighborhood |
| BP | GO:0006261 | DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0006270 | DNA replication initiation | IEP | Neighborhood |
| BP | GO:0006275 | regulation of DNA replication | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| BP | GO:0006772 | thiamine metabolic process | IEP | Neighborhood |
| BP | GO:0006808 | regulation of nitrogen utilization | IEP | Neighborhood |
| BP | GO:0007059 | chromosome segregation | IEP | Neighborhood |
| BP | GO:0007129 | synapsis | IEP | Neighborhood |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | Neighborhood |
| MF | GO:0008395 | steroid hydroxylase activity | IEP | Neighborhood |
| MF | GO:0008902 | hydroxymethylpyrimidine kinase activity | IEP | Neighborhood |
| MF | GO:0008972 | phosphomethylpyrimidine kinase activity | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009438 | methylglyoxal metabolic process | IEP | Neighborhood |
| BP | GO:0009639 | response to red or far red light | IEP | Neighborhood |
| MF | GO:0009672 | auxin:proton symporter activity | IEP | Neighborhood |
| BP | GO:0009939 | positive regulation of gibberellic acid mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0010015 | root morphogenesis | IEP | Neighborhood |
| BP | GO:0010112 | regulation of systemic acquired resistance | IEP | Neighborhood |
| BP | GO:0010113 | negative regulation of systemic acquired resistance | IEP | Neighborhood |
| BP | GO:0010196 | nonphotochemical quenching | IEP | Neighborhood |
| BP | GO:0010268 | brassinosteroid homeostasis | IEP | Neighborhood |
| BP | GO:0010325 | raffinose family oligosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0010500 | transmitting tissue development | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0019243 | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | IEP | Neighborhood |
| MF | GO:0019825 | oxygen binding | IEP | Neighborhood |
| CC | GO:0031261 | DNA replication preinitiation complex | IEP | Neighborhood |
| BP | GO:0031497 | chromatin assembly | IEP | Neighborhood |
| BP | GO:0031507 | heterochromatin assembly | IEP | Neighborhood |
| BP | GO:0032102 | negative regulation of response to external stimulus | IEP | Neighborhood |
| CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
| MF | GO:0033984 | indole-3-glycerol-phosphate lyase activity | IEP | Neighborhood |
| BP | GO:0035825 | homologous recombination | IEP | Neighborhood |
| BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | Neighborhood |
| BP | GO:0042182 | ketone catabolic process | IEP | Neighborhood |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0043901 | negative regulation of multi-organism process | IEP | Neighborhood |
| BP | GO:0045824 | negative regulation of innate immune response | IEP | Neighborhood |
| BP | GO:0046185 | aldehyde catabolic process | IEP | Neighborhood |
| MF | GO:0046976 | histone methyltransferase activity (H3-K27 specific) | IEP | Neighborhood |
| BP | GO:0048285 | organelle fission | IEP | Neighborhood |
| BP | GO:0048444 | floral organ morphogenesis | IEP | Neighborhood |
| BP | GO:0048609 | multicellular organismal reproductive process | IEP | Neighborhood |
| BP | GO:0048829 | root cap development | IEP | Neighborhood |
| BP | GO:0050777 | negative regulation of immune response | IEP | Neighborhood |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051596 | methylglyoxal catabolic process | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0055070 | copper ion homeostasis | IEP | Neighborhood |
| BP | GO:0055088 | lipid homeostasis | IEP | Neighborhood |
| BP | GO:0061727 | methylglyoxal catabolic process to lactate | IEP | Neighborhood |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | Neighborhood |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0070734 | histone H3-K27 methylation | IEP | Neighborhood |
| BP | GO:0070828 | heterochromatin organization | IEP | Neighborhood |
| BP | GO:0080156 | mitochondrial mRNA modification | IEP | Neighborhood |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Neighborhood |
| BP | GO:0090697 | post-embryonic plant organ morphogenesis | IEP | Neighborhood |
| BP | GO:1900864 | mitochondrial RNA modification | IEP | Neighborhood |
| BP | GO:1903046 | meiotic cell cycle process | IEP | Neighborhood |
| BP | GO:1905392 | plant organ morphogenesis | IEP | Neighborhood |
| BP | GO:1990066 | energy quenching | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |